YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09738
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIISIIFLL IGSSTAAVLE HQLIWKESRM IEMIRNGEYP AYLEYRDRMV ASRSSNLATV  60
   61 VQSTTDYVYY EYMGNITVGT PDQNFIVVLD TGSANLLIPG TNCTTYCEKK RLFNEKASST 120
  121 YIATNRPWQI KYASGDAYGT LGIDTVKIGG SGEAQLAIPR SYLGVADTVG SDFKWSPKEG 180
  181 IFGLAFTALA VDNITPPIIN AINQGLLDQP LFTTWFGQRG APGTSASGAF TYGGLDKNHC 240
  241 GPVIGYAELT NARHFQFQAT GFSLGSYVST TTYEVITDTA TSFLCGPQAA IDNLAKAAGA 300
  301 TWDPTNQVFN IPCDADAGPI KMKIGQFNYV IRANNYILKI DTNSCLFAAI PQNYAGFGPS 360
  361 WILGGPFMRQ YCNVHDIGQK RVGFCLSLA

Type	Start	End	Confidence
Signal Peptide	1	16	0.97
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	389	0.99