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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-21
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAVLLLLF FIQNVQNFDK IELEDITVYF PLKVDYLAPF GCATGTKCDD EAALNNGTIA  60
   61 ALGLMRDCYI QSTILNINSK IAVSDVCEMD LSSVKGFDQT SVLMNSQTNS LAKSVMYFLD 120
  121 KYQWKKVALV SPSTVLTAFA TRVRSDLLDA LTANKIDILV DSRLDPMSDI TDKVKEDAEK 180
  181 ARIFIICDWS SNANLLRNYL FKLGEMNKMQ SGEYFVLGYI SYDTNYQWLE ASSGDQRLKI 240
  241 TPRWDRIKLL FDSIQYLADA TNDALNIGAN IYQSDIFYEY LISRKIDSVT GVTEFIDGYG 300
  301 AIVGSIQIYY HFSSSSHNSY SLFPCARLAQ SSLLNTVWSL TDYSEGLSID FVNKSAPKDT 360
  361 PVCGFYGENC GPPANNTFII VISVGVAVLI GLAIAAAFLY KRYRYERRLH SLFFMIDRNQ 420
  421 IILKKHTNLM SQQSLRSMAS IHGSVVAASQ TLRDSHFFIE DYNNASSINA SSIFNTGSTA 480
  481 RAGPFGPIPG FGGVTGASED EKWHQIPDFG VGLYEGRTVA LKRIYRSDVE FTRSIRLEIA 540
  541 KLQESVNSNV IEFVGMVVQS PDVFVVYELA QRGSLKDILD NDDMPLDDVF RSQMTKDIIA 600
  601 GLEYLHSSPI GCHGRLKSTN CLIDARWMVR LSSFGLRELR GEETWQQEDD VQEGKDQLWT 660
  661 SPELLRWSTG LSQCGVLLVQ KSDVYSLAIV LYELFGRLGP WGDEPMEPRE IVSLVKREAL 720
  721 AGKKPFRPDM AVLKESPRIV QETVVAAWTE DPLNRPSLHQ IKRKLKPLTI GLKRTIMDNM 780
  781 VSMIEKYTDK LEKDIAERNE ELEGEKAKSE ALLKMMLPEV VADSLKLGSN VSAESFENCT 840
  841 VFFSDCPGFV EMSATSKPID IVQFLNDLYT VFDRIIDQFD VYKVETIADA YMVASGLPVP 900
  901 NGNHHAGEIA SLGLALLKAV ESFKIRHLPN EKVRLRIGMN SGPCVAGVVG LKMPRYCLFG 960
  961 DTVNTASRME SNGIPLRINC SGTAKEILDQ LGGYEIEERG IVEMKGKGKQ MTYFVRGENS1020
 1021 DMRRERIIRE RVKFASLKKA QIQEKTYEFS LNKLFIVKSF LKLLIRYLQM RRHPISNHNV1080
 1081 VTVKTCMRTI PPQEVYISST LPYEDSEEEA STVYDTVTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle