YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09553
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTMRGPFM FILGVIFSGF LFSMIYLKDN RIRDYQNSEA IIETRVQRSS RVELVKSVDK  60
   61 CDCVSEKSGK TYNFCYKDPQ NANSVGKKFS CDHLPILEKL NILEPSGSFV DLTDIAENSK 120
  121 NLIFASAASD DHFQNEVGTI SAIYKYYPDA KFILYSLGLQ AANISKLKSM FKNLEVRVFN 180
  181 TIGYPDYTNH WMEYRFKPLL LAELLKEHPN IWWMDAHLSV KKPNMVELMM KEVAEKTKKS 240
  241 ETKVTVSIYF FIYSSHSNFA TLNTALLDYF PTNSIGLLKD PNLGSQMGAN TIYMARTQYT 300
  301 METFKWWVLC ALDYTCMKPP GAQVSCRFPN NDRNTQFAHC FRFDQSVLNL LMLNDFQDHH 360
  361 KYWSSLGHLF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.89
Transmembrane Helix	8	27	0.93
Non-Cytoplasmic	28	370	0.98