YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09540
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTLLAFVA ILGMCSATVV QHKLIYRESP KMQMMRRGEW GAYVQHKAAL RDANPAVFAS  60
   61 APQNVNDFGD VEYLGNITIG TPPQQFIVVL DTGSANLWVP GSNCDGTCKG KSEFDSSKST 120
  121 TFKKNGQSWQ IQYESGSAKG IMGVDTVAFG GASEQQLLVP STTFGIASHI SSNFKNDAAE 180
  181 GILGLAFTSL AVDGVTPPLI NAINKKILDQ PLFTVFLEHK GTAKNVGGGV FTYGAVDTTN 240
  241 CGPVIAYQPL SSATYYQFVA DGFKLGSYSN NKKSQVISDT GSSLIGGPSA VINGFAQALG 300
  301 AKYHSDDDAY YLPCSTSKGT LDITIGGNVY SIEPVNYILD VGMGDTCVFA AFSFDFGGFG 360
  361 PSWIFGDPFI RQYCNIYDIG QQRIGFAKSL QPSSK

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	395	0.99