YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	asp-5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTFVALVA LLGLCSATVV QHKLIYRESI KMQMMRRGEW GAYVQHKAAL RDADPAVYAN  60
   61 APQNVNDFGD FEYLGNITIG TPPQPFLVVL DTGSSNLWVP GPSCDGSCKG KREYQSTKSS 120
  121 TFKANGKPWQ IQYGSGNAKG YLGEDTVAFG AVTEKQLPVP STTFGIATHI SSDFKNDAAE 180
  181 GILGLAFTSL AVDHVVPPLI NAINQGLLDQ PLFTVWLEHK GSANDVGGGV FTYGAVDTTN 240
  241 CGPVIAYQPL SSATYYQFVA DSFKLGSYSN SKKYQVISDT GTSFLGGPKA VVAGLASALG 300
  301 ATYHSNDDSY YVPCATNIGT LDITIGGKVY SINPVNYIVD VGMGDTCVFA AFAFNNFGFG 360
  361 PAWILGDPFI RQFCNIYDIG GQRMGFANSL QAN

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	393	0.99