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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE09229
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPLLLFCLI PWVSSKAYCT KWTEIKSGDS CWNIASNAKI SVERLQQLNK GMKCDKLPLG  60
   61 DKLCLASSTT KPVCEKKLKL KAEDTCFKIW SSQKLSERQF LGMNEGMDCD KLKVGKEVCV 120
  121 AVGTKSSRNS FAAPSQSNCN KKHKIQKGDT CFKIWTTNKI SEKQFRNLNK GLDCDKLEIG 180
  181 KEVCISGPMR TKRDVEKESV DTNCLSKLKI KEGDTCYNIW TSQKISEQEF MELNKGLDCD 240
  241 KLEIGKEVCV TVNPTSIAFE LPAQSRCGKT YRFKKGDTCY KIWTSHKMSE KQFRALNRGI 300
  301 DCDRLVPGKE LCVGRAKHKR EAGAATSEVD CSKKITVKPG DTCFSIWTSQ KMTQQQFMDI 360
  361 NPELDCDKLE IGKEVCVTGN VGNNIQENVL EAPVQTQCPR KVKINPGDTC FNIWTSQRMT 420
  421 QQQFMDLNKR LDCDKLEVGK EVCVAGENIN QGNNQETPIA SQCQERVQIN PGDTCFKIWS 480
  481 AQKLTEQQFM ELNKGLDCDR LEVGKEVCIA RGPGNGVTNN PRATTAPATR PSNQGNNSTS 540
  541 TSQCGQKTEV KEGDTCFKIW SAHKITEQQF MEMNRGLDCN RLEVGKEVCI VRGPGNGVTN 600
  601 NPRVTTPVSG QSRTTSSSNQ GNNSTRAPTG QCEQKIKVKE GDTCFKIWSA QKMTEQQFME 660
  661 MNRGLDCNKL MVGKEVCVSG GSNPGSPEEN SNTTKPALPM VETSGTCNEY ATITPGNTCF 720
  721 NISVAYGINL TDLQKTYDCK ALEVGDTICV SQNYTCQHRI EVIKGDTCWF LENAFKTNQT 780
  781 EMERANEGVK CDNLPIGRMM CVWSADDRKL PNMTCTEWKT MNDESSDCYG EARNSSITID 840
  841 LFKFLNPRVN CTNRQKIPKG SKICVKSQST KNCTSIQMFN QYQSCNQVMQ QNQISMRKLM 900
  901 DLNPTFRCDR LQKSEQVSQK ILKANCKAKP ICLGTGPFKQ EQCISSRRVT PENDNCEKIT 960
  961 RLTGLSRGQI ETLNPGIKCE KPFEWGSLIC TASLGVDTRQ AQDLIVTSLK DIAPELVKMF1020
 1021 DNYNSNPSEA NENAMNEELL ADLQKPAVNS KLKELYKSDE KIRKILDSQH PLPREKYCEE1080
 1081 IKKTKMSDNI KNCYCENEEL LLYCQVLATK VILDGEDWNS PQNTTVLRAF RSKRQVGCSF1140
 1141 STPSSGEDTL SVFKNLYGGC FAGGCTFPFG LVEISVEADI CVPSVTFAKD TVLYCAKDKN1200
 1201 DCTKKENEDV PGLKYLADRK LGGVISLCAV GSKLAKLLTK GGLSLCWEIL AADYFGFIGK1260
 1261 LDLSSNLRLV VVDVEGGATM KVHGLAFPDM CEHSEFQCED YCRWRADEWD NGKAYGYLKF1320
 1321 KALKVFGFSG FKLLEESFDE PSRVGCDEGK EAAVVLRNTR TCKDQAEREI QRRCWSGDDM1380
 1381 MGWDKLDKEW SFAFQPHIFG RTLFVCEFTD KHNQKIGFDV YGGKSDNKGK ATFYYVVKND1440
 1441 GIYFGTEKYK EDKLMGSWDN KCEEDKPEPP KPDPSKVEEP TGKSSLPAAS CGKRIVGYYT1500
 1501 GWGDREITEN QLKKLTHVIF AFVAMYEDGS VKFGAVSEDD SGPQAAKKAE RRFLNMKKKA1560
 1561 RAANSGVRVL FAVGGWDNSQ YFSSVAADSG KRKKFVDSIA SFVEDQKIDG VDLDWEYPDS1620
 1621 NGKDAKNHVQ LIKEIREKFS EMAKKKKRKD PYVITLASAA GEWNLRKGYD LKGILKYADF1680
 1681 INVMTYDYYG AWESKWGAYT GTPAPLYFGS LKGFSGKLNA DFSMKFYACK TEKPSQLNMG1740
 1741 VPFYGRYWKN VLGPIDKSDN MWRTAAPQNG KYEGGYVGWR NLAKEGWNKG SASWHEKTKT1800
 1801 PYIMNNGAKK FLGFENERSL KEKMKYATDR NLGGLMIWAL DLDDDADTLL NLVSSAGLCS1860
 1861 GGKGDKVTYK CVPIDDVRWW TPENSDEKKQ GQCGKSAPLI NGFYPVCDPD DPGFSCCGAA1920
 1921 GYCGSGKEYC DCKGCVNYRK DPDLIIKKPV KPSREIQWYT QDAPDGKRGR CGKDIEKING1980
 1981 KMPICNPDDD TKYCCSNGGY CGIGKEFCSC NGCVDYRKDK KDQNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle