YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE08975
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPRQIAFPT LLGLLILSTY LYSYIFKESK YIVIFDGKHV NFTGIEDFIP PFVNIVSDFF  60
   61 VASNYKLMSC GIRKSMSQLT VNTMCLLNDE SNFMKGNHHL NETWLSNRSC GNNPKFRIPS 120
  121 LLLLNDTDTV RFAFIRDPIE RFVSLYLDKC LKENACWNCG EDMRCVVKEI YNGLKKVQNH 180
  181 KEWQPIPTYM DTHAAPLSWN CNFDKDLAKW HLLMMGADVE ERKSSIFHLA NIFKRQGVSH 240
  241 AVVEKVKEET MAGETAHSTH KSSKRVEAER QVREDPVVRD YLHKIYFFDY LVFQFNRNPL 300
  301 DAKYQTDFWK MTDF

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	314	0.97