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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7497732
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSETFVPSI FSYKHRLLHL SVLFFIVPYW YSYYNDQHRL SSYSVETAMF LSWERAIVKP  60
   61 GAMFKKAVIG FNCNVDLIVS GVRVVDALNT TCSEGKDQET LETLADLHQT FAHFFQRGAA 120
  121 AERYMSSEDQ FNLLVAESEA STRSHHHIGG NAALMADRIA ANFPSTEVYL VGPIGPRSQA 180
  181 LLHPSVKRTN STRILKDELH VILEYKQGEI LGDWVAPSSS RFITSHDHFS GSMVVMEMFF 240
  241 KAIAQFRPDL VVITGVHLLE FQSKEMRQEK MRLIKRNLLQ IPPKVPIHLE LGSLADEIFS 300
  301 TDVINKILPY VDSLGINEQE LTFLSHIANG PHMEEYPVQA GTVHVHKVVE MLHWLLKTYG 360
  361 RDPTGQIASK TGYRLSRIHF HCLTYHIMVS SGTDWSNLAA GLAAGARIAG RLSCNIGANT 420
  421 MDSELLEIRT PANFVLDKKI EKNYQFEAHK YMLTPFNIAR CSTRLIRRKP PGGGILDEGV 480
  481 TFSDVHNVIL NPTTRLPYPE EQLREHIEKT SSEIMKERNK IRYGTRKKKD SGAIDFSQLP 540
  541 IEEHVVLLFP GQGAQFVGMG QKVMDIPAAR RVFDEASEVL GYDMLKVCQD GPKQKLEQTL 600
  601 YCQPAIVTSS IAAFEALKAS DPSIEENLTD TAGFSVGEYA SLVAGKVLSF SDAIKIVKTR 660
  661 AEAMSECAKL VKSGMVTIRV KAASKLDKAM ADARKVAAEN RELVVCEVAN YLYCGVRVIG 720
  721 GSETCLKYLE ENQEKYNIQV MKRLAVSAAF HTRQMESAVE QVAKAFQNVE IHRPVCNVWS 780
  781 NYSGKVMSSK KGDVRGAVAK QINSPVRWEQ IQQSLFRKHQ NEAFPRFYEV GAGRQLVAEL 840
  841 IFFIVCVIFM LALYIMIMSA RFILKSFNKQ LFIFAQFFFQ PSVLFFGGQK NSKNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle