YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE08854
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRAFASWE AANARMLRAG QILHADSYFF LYFYKLKTFC DEQLFCFSLI MMRFHNDFQK  60
   61 MERMRNMEFN LLFLLTVEMI ITIVGYYTKD TFGILNKNIT DTIYLFWIFN LLLASFFAGI 120
  121 LSPINFAIYR IAFRLAHSSA TAYIFYTTGF MMIPFYLVGY FLLESLYITN GISNQQMNYP 180
  181 SKWILNLADE YQKRTMVENI EGPRIHPFTS VACESIRKGA FEKNETFDDL FEYETAYEDV 240
  241 LFPIIQSSKS KRCGTFIV

Type	Start	End	Confidence
Cytoplasmic	1	68	0.95
Transmembrane Helix	69	88	0.94
Non-Cytoplasmic	89	104	0.92
Transmembrane Helix	105	129	0.87
Cytoplasmic	130	141	0.84
Transmembrane Helix	142	163	0.91
Non-Cytoplasmic	164	258	0.98