YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE08784
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRVCVIGA GAAGLAAAKH SLAQGLEVEV FEQTGNVGGT WVYSKQTGSH SSMYQNMTTN  60
   61 LPKEVMQFRG VPFRNELPSF LTHENVREYL QEFSQGMPIH FNQTVENVER IDDKWKVTTH 120
  121 HGAGIDEHFF DIVFVCNGHY FAPNNPYEES AFEGSFIHSH DYRHSKDYID KEVIVIGAGP 180
  181 SGIDISLQLS ETAKKITLIS KKATYPTLPD NITQISQHVK QVVPEGCETD DGTLITADAI 240
  241 IVCTGYFYKY PFLSDNILRV KENNQLVSPI FEHVVHAEYP NSLYFIGLNL VTITFPLFEY 300
  301 QVKMALSFAT GRAPIPDRKM LIDYEKNQIE HQKSRGLAVR FYHLLQSEQW EYLARIAKLG 360
  361 NFDEWPYMKT IENITTYLQE KRKSNVIEYK NINFKLSEDG MDYEVVKC

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	408	0.99