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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bicd-1
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESELEKLR QDIAILTEKY EQAKEDIHKA ANAGLELLRQ KEDLEKRLAE MQAELDLART  60
   61 EIDKTNQTLA EYRSQHQRST RSELENEESL LEESSAKEEE YLQRIAKLEA DLKKKEQELA 120
  121 EKKEELESIE KKHSKEIDSG AALEDERRKL RAELKETKER EQRLISEYSE LEEENIGLQK 180
  181 TVANLRGSQV EYESLRIDNN RLEETIEIMK MAAEEDEILR VIADKQLEEA LLTAQQERDQ 240
  241 RLAMKRELEQ TRNAEHISSL NDMLFGLERL GEDGELPPPQ PGASDLFSEL QGSSDVKVRE 300
  301 LEAAKEGLQE ELKSREKIFI EFVTGLADTL NIHRPTNELD YMHARQQKDV VLEKIQNIAR 360
  361 DTDRHDKEGE EKRSGILKAD LRTLVLVAGE KSAQLAAAQD AMIQVSDQLY QFYHQMTQNQ 420
  421 GVQTEKSVQE IVKKLRLLAR ANAEDVPRVS LADEGVESGT ETDVNASRSI PLNSDRLVIA 480
  481 PSFAKEIEKK LASVKIGDVL SETDLRQRIL TEGNAISETT ESLKKMIQVV KRTSEQAFNQ 540
  541 AVMASGAENE IEMQNMKLRS LLSTKRDQIS TLRTVLKSNK LTAESALTSM REKYESEKKM 600
  601 MMEINDKMRR ELKQLKEDAA TFASHRAMFT ARGEELKSKV EELSNELRAN EEEKKTLNQL 660
  661 LRLAIQQKLT LTQRLEEVEV DRDRQVFKRS STRAPTREKN LNRRYSAFNY VHCFKTFTKK 720
  721 YLPATESSSL SGFNNNSSTA STFIFGGLEG RATQGRQSAI SWWSGDDVTT MRRRRTPTPE 780
  781 DPNDQESINT QNHVITTWPY DLKNEEDPQL LIDLMMEEMR VESEIERMRL ALKEQESIFA 840
  841 DCQFVIALFS LPPILIYLAV SVLLFPPML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle