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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7497276
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSLSSLNNE NLNDEIIDFE SKCKRFPVMF KRAVCIHSSL QFVDLFMQNL MFSHGFSSTP  60
   61 IIARQEDETE VLSKTMLSFY KIRNEFREIF RSHHRGNVSE VAIFIGTCPV RSTYSYRVPI 120
  121 TICEAEDSTH KSCGDTCAEL NDFERRKINR DLFMHSCSKE QQSNETNKTN KNHRLFVFIK 180
  181 GSEDMVNEEI EEELVHEFPP NFFFLFFFFR DPPFGSKQSF HYSFIHEKCN CDGVPAPRND 240
  241 GKWLRMVPYI MLHKILFLIC LASFIPTIGS ISGTKDVKSK NCDGSAGLTC TFPGDCRIGD 300
  301 TVKVNCTSRK GCPNPVSRNN VEAVCRFCWQ LLPGDYDCEP ATNCSTSSTK LLVTKCSAHS 360
  361 SVICMGQRNF YKRIPCNWSS GYSWTKTMIL SVVLGGFGAD RFYLGLWKSA IGKLFSFGGL 420
  421 GVWTLVDVVL IAVGYIKPYD GSIRNMIGKV AGTAAIAGIS FLAGKYSNDD LPIFRNVQSA 480
  481 TNVPMNQIQV SEPMTVKPAS LNADAMGPSR SAEIMKHGYP GFTNVRTYED FVLSYDYKTR 540
  541 TAHWVCEHLT PERLKHAEGV DRKLCEFKPD ITFPQKFLSQ NTDYKCSGFD RGHLAAAGNH 600
  601 RKSQLAVDQT FYLSNMSPQV GRGFNRDKWN DLEMHCRRVA KKMINSYIIT GPLYLPKLEG 660
  661 DGKKYIKYQV IGDNNVAVPT HFFKVALFEV TPGKFELESY ILPNAVIEDT VEISKFHVPL 720
  721 DAVERSAGLE IFARLDPKSI VKENGAKKGG LLW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle