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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE08403
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSFYASST ENTPMMMTQA RVLSTGTTDN GTIRYDEVDE TKRWFNRRFC FLTVIGIAVL  60
   61 LLAMVVIVVI VLLLTQLKAA NSNAQNAMSS SKVQLEELTR KLSQPLEQLG PTLERLSNMP 120
  121 GFPMGPSPTT QTPPGVPPIS PIVTGPNTTP ESPRRSPKAR YEWKGCQNLG KCELSGYTKP 180
  181 PLVILSLDGF AREYVDRNIV QTLNHIADCG VKADKVYPSY PSKTFPNHYS IVTGLWPESH 240
  241 GITDNSVFDP TISPVLESMK STKYEKFFEG EPIWSVYKRK TGKKANCLFW VGCAYNNSGY 300
  301 APDVAPAYNQ ELPFRNRIDT VVEWLKLPVD ERPGLITAYL HEPDNAGHYQ VDEEDVDEKL 360
  361 AEIDENLDYL MSRLSEEKLL ECINFAILSD HGMQLIDKTY YFQDYLDLKG LITAKGVVGR 420
  421 VYINDTTISV NDVVDKFRCK IDTVKTNTRS DVPTRKHYSR DPRVGEVLLE GRAGVTFYKS 480
  481 KADDYELSGD HGYDYFNPKM HTIFYARGPS FKQNTTISPY QNIQYMNLWM NLLGIEGAVE 540
  541 TNGTIGFFDN ILTNPPRRDN PTNVIGECPM IAFPSVLKCS GNVSAETLNQ LSVKLTNCAF 600
  601 SPTNIPLYSD NHCFQNYCDN SVIVSRKGND ARRAIIEVLS RDEASNPSNF TFLNAKYQSN 660
  661 CPSHIPTGSL TIRQNSQLSS MVDERIDVPN NFLLKVLDPL QAKSMEYLNK FGKMYVISGT 720
  721 ATDINHDGIA DSNGSVITHI YRIMLICNST WLLMNPPLCT DSDSMDTLSF IFPITEQSTI 780
  781 DCMSSDDILL DYTATIFDVE RISGFQFGIG ALSQNQNTII RRKISTKLW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle