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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE08354
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQKSVYFNS LLSSLGISAI FEIKAAANKQ FANQLVIQVP VNSFKNGKKI KGVGSAFRET  60
   61 KHFSSTTTMH GPKRIFYGKG VARAFWMLIV GLALAMLCFQ IFILLQMYFS KPTLSQVSFI 120
  121 VNEGGMDFPA VTVCNFNPIK KSYVRELNVS GDLTGETLEY LLQTNMDAMF LFSNLDRHNL 180
  181 KETHDEAETY FQNHTDFQII KFLRTAGYDC GEIFDCCKYM KQKVTSLGKC WELDLRNLAP 240
  241 EWMRKQISPG SEAGLQIVVD AQLEEELKGE NDDAKAIFSD IYENGFRYFI HPPGTNAQLT 300
  301 SEGISVSPSR TVYSAIKTVT HNLLNRGNWG NCSENWPEGY NTFLSYSASA CRALCIAQFF 360
  361 NDTCGCAPFT YNVDGRKKIC APYESITCMD NHMLKKVNGT DYLELPDCEE CHMECQSTSY 420
  421 TSYNSYGDGF NRGSLEWLKK ISNKSETHIK NNVAVINIFF LEMFYTSYSQ VQATSLTEIL 480
  481 SDIGGNMGMF LGMSVITITE LSLFFSKIFW IMVSKRRRQY MYSKKTHEKE KEHQLDEAVK 540
  541 EFQERRSRRN SRENISALGH YSNRITPVDD FQTKFGYKNA FSEGNMSNSS LDSVMELKFD 600
  601 INELRRQLNQ PSTDGIARIR LPHQTSRQNS TENYYSSSPP IFTIEPMSRK QSKTSLPSSL 660
  661 SPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle