YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE08241
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIVLQKFKT RCFIFSQQLL SKRHGFDRID RIALLAVFVV ALINYISFPE RRKFQIPAEL  60
   61 YAYSPAILPY KEFFFPTRDV QILIQGIEHS PATFTLPTSG QIFCFVETST KYYKDRVPSV 120
  121 ASTWLPRCDH GRFFTKTHLP YPDIAYSTVY RNLRDTYDDL FRKSIFSLYY SYTSISKHFD 180
  181 WYLKTDDDTF VAMDHLREYL NTLNPAEPLY LGYRLAPFMN NGYNSGGSGY ILSNAAMRMF 240
  241 VEQLYHNVRL CPYDRGEDRG MGRCLESVGI TPSDTRDDQE LNRFMPFRPA EIPIIGSKWH 300
  301 YFPLKYPFIS KKFVTLHRVP PEMMISLDKS LYSENGEPTF NVTDFFNY

Type	Start	End	Confidence
Cytoplasmic	1	28	0.88
Transmembrane Helix	29	48	0.84
Non-Cytoplasmic	49	348	0.98