YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07962
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIEWFAIGV GAIVVLYILY HFIKMIWSIL GLYVFYQPID LKKKAGASWA VITGGTDGIG  60
   61 KSFSFELAKR GFNIYIVSRT QSKLEQTKKE IMEKYSNVEV RFATFDFTNP SISDYKKLLS 120
  121 QLNEVSIGML INNVGMLFEY PENLHKTVGG IDVVANVTIL NTLPVTLLSA GILPQMVSRK 180
  181 TGIIVNIGSV AGAAKMAEWS VYSASKKYVE WLTGCLRKEY EHQGIIIQAI TPALVATKLS 240
  241 GHTETSLFCP DSATFAKSAL NTVGHTSQTT GYINHQIQCE MLALFPECFL DSFVKKSSVE 300
  301 TREKALAKKE NKHLLQLFEF FWKLVICIGD IVLYVTLFNK IFKKSESSF

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.57
Transmembrane Helix	5	35	0.65
Cytoplasmic	36	319	0.50
Transmembrane Helix	320	338	0.68
Non-Cytoplasmic	339	349	0.50