YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: adm-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTLDLKLS SRRQWNPVRC PVRLEVDGSA QTPTSLVQTA LNNPSFDLVI AAPNGQNVYI  60
   61 PFTEDRKLFT ANIADDPSTS SLISHCHFEG VTEDGRHALS LCDPGEITGL LMTQTNRFGL 120
  121 STSNNGSFVL IPYVENNCDL GSLVHSSSRK KRQIGKQNTV IDRNPSYIRE HLDGRKRFVE 180
  181 LALVADYSVY TKYDSDEKKV NDYMQQTMNI LNSLYFPLNI RITLVHSEIW KKGDQISVIP 240
  241 DSKETLNNFM EYKKIMLKDH FFDTGYLMTT LKFDEGVVGK AYKGTMCSYD YSGGIYVDHN 300
  301 NDTVETVATF AHELGHTFGM DHDPNDKDVC YCPMPRCIMN PQSGHMEVWS ECSVKNLASG 360
  361 FNRGIDLCLF NEPGKKPSDA KCGNGIVEPG EECDCGPLKC DNHCCNGSTC KLIGEAECAS 420
  421 GDCCDLKTCK PKPRATVCRA AIGICDLDEY CNGETNDCPA DFFVQNAALC PGKENEFCYE 480
  481 GGCGSRNDQC AKLWGPTGKN GDENCYRKNT EGTFHGNCGT NAHTKEIKKC ETENAKCGLL 540
  541 QCETQAERPV FGDPGSVTFS HSTVYSSLKR DDKKFCYVFK SAYGGLNAPD PGLVPDGAIC 600
  601 GEEQMCIGQK CHKKEKISKV TAQCLDNCNF RGVCNNVGNC HCERGFGGIA CEIPGYGGSV 660
  661 NSNEAYRFRG ITLSSTFLVF FCLFGIFIGG LCVYYRVKRK RNLVSEWWSV VKKKFDLHGD 720
  721 LVPVRKAPPP PYAQRIRQSF TAMWGEDHSH VAVAQPAHPR NCYNSCCRQP PRFDPPSIPM 780
  781 VTLKNPNLAS PTPLLNPAEK EEQNQERATH QHVELYPVAE SFRSDSAASF NTRTGSFRPN 840
  841 VQPPPVPRPS DDVLSKLNED LAKEKNAKFD RLNKTLPLPP PLPKEKPKTA SSTSLRRNES 900
  901 IRPEQAPPPP PPAHAKPTLP TKQPKVSEDA AATEEKVDVR SMAAIFDQKL KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle