YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07857
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYSMRKIES DQMDRIALYT LLLTFSLSLI VFPLYRNFLI PADLYTHFPA IIHPYREYYS  60
   61 LTRNVNKLTQ GIEDSEATYD LPTSGQLFCF VETSKKYFND RVPSMASTWL PRCDNGRFFL 120
  121 KTPLVDEKIP FSTVYRNLED SYYDLFRKTL LSFYYSYTYI SKDFDWYLKA DDDNYFMIDH 180
  181 LKEYLDTLDA SKPLFLGYRM KPFLEGGYNS GGAGYLLSNA AVRIFVEHLY HDEKRCPYDW 240
  241 AEDRGIARCL ASMGILPSDT RDNDGSCRFL PFRPSEMPGI PEAYHYYPLK NGSFVSEKFI 300
  301 SLHRISPRKM IFLDSILYPS SERRLFTPEF FDIF

Type	Start	End	Confidence
Cytoplasmic	1	15	0.95
Transmembrane Helix	16	35	0.93
Non-Cytoplasmic	36	334	0.98