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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLFGVKRW LRRGDEASDS KADASKEVNQ QNLSLSFNEH HLDMRQLSEK FSMSKLDIVD  60
   61 PKVSRGLSKQ VAAERLESDG RNALSPPKVI SNWKLFLRQF KNLLWILMFG AAALSLVAYI 120
  121 YDPSDLTNLC VGIFIIVIIF VMCIVSFFEE KKGVEVVRAF QSLMPLSCQV IRDGVEQTLN 180
  181 PEELVVGDIV VVRSGCKVPA DIRVIACTDF YLETSSITGE AEPLEFNSAM ADQKTSIFES 240
  241 YNIAFNGSFC VDGEGYGIVI RTGERTVIGQ IASMTLDQKE QKCKFQVEIG RFVKFITVMA 300
  301 IIMAVIIFSV GLGINKGHDV IRYFVTGFLM VIIANVPQGL PTTVTTELTI IARRMAKKNV 360
  361 FLKKLEKIDS VGATTLIASD KTGTLTKNCM TVTDLWYNNS YNSGRPENRR RSTKTRFSIT 420
  421 SNPAQSFDAP LSDLLSVVCV CNKARIENTV TVNRPPPNVD SELDMSMYRI QPVKEMTIVG 480
  481 NPSEVALLRY ASAMLDAKEL RESFQVVFEI PFNSVRKYHL ILATNKNTWN QVDKNDDVEF 540
  541 VVMIKGAPEV LIKNCSTMNI NGESKELDLK RMEDFNEAYE AFGDEGCRVI GFAQKKFRAR 600
  601 ASTVFSLKSN TVPMEDWDFL GMSAIMDPPR DDTPKAIKAC KAAGIKVYMV TGDHKSTATA 660
  661 IARQIGMIDT EEVSRVDHNQ QIIRRSNSQD WAVITGSELP ALTQKQWDEL LQHRYIVFAR 720
  721 TTPEHKLMIV TESQKRGECV TVTGDGVNDA PALKKADVGV AMGLAGSDVA KQAADIILLD 780
  781 DNFSSIVAGI EEGRLLFDNL RKTIAYTMAH MWPELVPVIL NFFFGFPLGL TPVQILSIDL 840
  841 ISDIPPAVSL AYEGPEADIM LQPPRKKDTH LVTKGLITYT YLFMSIFISI GCVCAYLLSY 900
  901 YINGIGPWEL AFTASTYFKH GAANFTTAKG VILNEEQQMY MANQAAAAFH ISLVLGQAFH 960
  961 LWMCLTRRVS IFAHGLGNIV AIFAVIIDLL LICIFTFVPG VKYIFGSQPP PWQCWLVPIV1020
 1021 VGVWIWIFNE LRKLGIRKYP KNKFVRLTKW 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle