YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	djr-1.1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKSALIIL AAEGAEEMEV IITGDVLARG EIRVVYAGLD GAEPVKCARG AHIVPDVKLE  60
   61 DVETEKFDIV ILPGGQPGSN TLAESLLVRD VLKSQVESGG LIGAICAAPI ALLSHGVKAE 120
  121 LVTSHPSVKE KLEKGGYKYS EDRVVVSGKI ITSRGPGTAF EFALKIVELL EGKDKATSLI 180
  181 APMLLKL

Type	Start	End	Confidence
Signal Peptide	1	14	0.67
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	187	0.96