YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: eat-6
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKDKKQEL HDLKQEVKMD EHIVPIEELV ARLGTNLETG LTRQKAQEVL AKNGPNALSP  60
   61 PETTPEWIKF CKNLFGGFAM LLWVGAILCY IAYSVDYFTM EYPSKDNLYL GIVLMTVVVI 120
  121 TGVFQYYQES KSSKIMDSFK NMVPTFALVH RDGQKQQVKT EELVVGDIVE VKGGDRVPAD 180
  181 LRVVSAFGFK VDNSSLTGES EPQSRSPDCT NENPLETRNI AFFSTNAVEG TAKGIVIYTG 240
  241 DNTVMGRIAH LASGLDTGMT PIAREIEHFI HLITGVAVFL GISFFIIAFI LGYHWLTAVV 300
  301 FLIGIIVANV PEGLIATVTV CLTLTAKRMA SKNCLVKNLE AVETLGSTST ICSDKTGTLT 360
  361 QNRMTVAHMW YDETIHECDT TETQTSQEKR TGASFEALVR IASLCNRAEF KAGQQDTPIL 420
  421 RRDCTGDASE IALLKFTELT QGNVIAVREK NKKIAEIPFN STNKYQVSIH DNGDHYLLVM 480
  481 KGAPERILDV CSTIFLNGKE SELTDKLRED FNTAYLELGG MGERVLGFCD FVLPADKFPK 540
  541 GFKFDVEEVN FPLKNLRFVG LMSMIDPPRA AVPDAVAKCR SAGIKVVMVT GDHPITAKAI 600
  601 AKSVGIISDG TETVEDIAIR RGIPVEEVNP REAKAAVIHG SDLREMSEDQ LAEIIKYHSE 660
  661 IVFARTSPQQ KLMIVEGFQK QGQIVAVTGD GVNDSPALKK ADIGVAMGIA GSDVSKQAAD 720
  721 MILLDDNFAS IVVGVEEGRL IFDNLKKSIA YTLTSNIPEI SPFLTYILFG IPLPLGTVTI 780
  781 LCIDLGTDMV PAISLAYEEA ESDIMKRQPR DPIRDKLVNE RLISLAYGQI GMIQASAGFF 840
  841 TYFWIMADNG FMPWDLYQLR AQWDSRAYNN VLDSYGQEWT YANRKILEYT CQTAYFVSIV 900
  901 VVQWADLIIS KTRRNSLVQQ GMSNWTLNFG LVFETALAWF MCYCPGLDNG LRMYGLRFSW 960
  961 WFCALPFSIL IFVYDEIRRF LIRRYPGGWV ERETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle