YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07656
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.83
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFSRAVII FFTIFPLISA TGHLRLELTS SKNFILQLKT NTSFQEIQLA MGNPRTLSFH  60
   61 PKDHQETLEI SFSNNVSDLT TVEYHMNSNE LNTYQTILFS DAVLLVQSVF KCDTGFVGDK 120
  121 CQDIITSTST TVISTTTTEI KTSTTKVIIV INDVPKEASA LQQSISLNVI HCSVLIVIII 180
  181 VLLILIIIVY IFLRPHHQKH VYIQPESPAQ NERKCSVLLE ESGYFSPLES PRYTEAPHTF 240
  241 LKVSY

Type	Start	End	Confidence
Signal Peptide	1	22	0.81
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	168	0.95
Transmembrane Helix	169	193	0.91
Cytoplasmic	194	245	0.96