YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07600
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASELNCTQL LNQWPDPETG DAKDLVISQF INTVVLSYRP FHYFILACVV IFAFFANILI  60
   61 LIVLSRKEMR YSGVNVTMML ISICDLVCAI AGLIQLYLRN FSVTYTSYIK AYTQLTVDYF 120
  121 QISFHAASLY LALGMAFCRV VAMSSRTDSR YTWQSPKYSL RIALLLCIPV FIFGSHNVLL 180
  181 NHVEIENGTI VLNISPLSLA NSCLFLKLAI FLNGLFFKIV PCILMMVLSF VILARMKSGK 240
  241 KASNTNSGNH IDAQIVRSSR FIQAVIVVFV ITEAPQGVLS LLGGLSINDY IKCCDTFLR

Type	Start	End	Confidence
Non-Cytoplasmic	1	40	0.99
Transmembrane Helix	41	64	0.92
Cytoplasmic	65	73	0.89
Transmembrane Helix	74	98	0.88
Non-Cytoplasmic	99	121	0.95
Transmembrane Helix	122	143	0.91
Cytoplasmic	144	157	0.97
Transmembrane Helix	158	180	0.87
Non-Cytoplasmic	181	213	0.85
Transmembrane Helix	214	234	0.92
Cytoplasmic	235	299	0.64