YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07227
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILFIVLSIV SIYLFDLFYW KRRNLPPGPL PLPLVGNLHM MSDDVKPGYS LFSNLKEQYG  60
   61 HVYTFWMASL PIVHVTDWNL IKQHFIKDGG NFVGRPEFPM SIELRQGPYG IIESHGDRWV 120
  121 QQRRFALHVL RDFGLGKNLM EEKVLGEVTA MLDRLRKTMD EVDMQSVFDA SVGSVINNLL 180
  181 FGYRYDETNI AEFLDLKEKL NNHFQLAAKP IGGLIGMNPW LGYFPYFSGY KNGLFYELVF 240
  241 IFKMCFIVMI QNWMGLVEMF RKQANEKLAT IDYESDDYSD YVEAFLKERK KHENEKDFGG 300
  301 FEMEQLDSVC FDLWVAGMET TSNTLNWALL YVLRNPEVRQ KVYEELDREI GSDRIITTSD 360
  361 KPKLNYINAT INESQRLANL LPMNLARSTT KDVEIAGYHI KKNTVIIPQI SLVLYNPEIF 420
  421 PEPYEFKPER FLESDGSLKK VEELVPFSIG KRQCPGEGLA KMELLLFFAN LFNRFDIQLH 480
  481 QSNPNPSVEK EFGVTMKAKS YRLKLKDRH

Type	Start	End	Confidence
Cytoplasmic	1	205	0.66
Transmembrane Helix	206	224	0.65
Non-Cytoplasmic	225	233	0.76
Transmembrane Helix	234	255	0.68
Cytoplasmic	256	509	0.67