YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07167
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMDMTLHFG EREKILFSWW KTGSLSGMAV SMLITFLLCI LYEAIKSFRY FLAVWNNQKR  60
   61 QQRHAEASIT NPQNSGGDNI SEDSIHIAPL VQLSGFTKRL FTSYRLAQGA LYGLQALLAY 120
  121 TLMLIAMTYN MNLILSIVVG EAVGYFLFTG NPLVEQHLTD CC

Type	Start	End	Confidence
Cytoplasmic	1	18	0.50
Transmembrane Helix	19	45	0.82
Non-Cytoplasmic	46	105	0.47
Transmembrane Helix	106	129	0.68
Cytoplasmic	130	130	0.19
Transmembrane Helix	131	149	0.57
Non-Cytoplasmic	150	162	0.50