YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE07136
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQPDEPSN STVGELPSQY KRMSAAREPS NSQSSKIVYF IVPIIVASCL LWMAHVQWKS  60
   61 SSKVEQFHKN VEEIENQEKI RIEGVHDLKE TLQPFADGYR TDNFIPKHNL AICEIKGNFP 120
  121 ELNAAICCYL HNPSLFTAAN KTISQDLVEN GLCSKEDSFR MTTWDKWTKY VTDKVCHVAI 180
  181 IQHPLERFSR SFVEICIKQK ACYNCQDNVD CFMKKLLREH SPLAEGLEGN YRTYVTHHFS 240
  241 PQTWNCHFNR DLNKIQFLKF GGSKEDLAKF LTDLDKILGE QGVEADVRSV ITNEINKIPL 300
  301 ELTPEEQVVK DNIRNNEDLF RLFRNLYEHD YILFGYSL

Type	Start	End	Confidence
Cytoplasmic	1	36	0.94
Transmembrane Helix	37	56	0.95
Non-Cytoplasmic	57	338	0.98