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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE07085
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRMDPKSH DVIVDELDFS TMPGTQSGVL NSRWTPIGLK NNFQAAGPYE FILTNNSRSY  60
   61 LNLKRTYLIF TFKITNSDGN IVKMETDEAK NTQVYAPINN IAHSIVKNFT LHINSQLAFH 120
  121 NSSNYAYKSY FEHVLMYGKE IQNSTLTAAG FYHDPVIGDH RSPGFQQRCA SIYNQGEIQV 180
  181 AANISIDLMN QPRVLLNGCN VKLTVYPNDS KFLIEAYNRD NNTEFQFKIT DVYALVNEFD 240
  241 LADGLSNALE SSIIEHKIIQ YPLISSQVRS FYIESGRLDA PANTLFTSKM PRRIFIGLVD 300
  301 SDAYNGSYDK SPFNFKPHGI SDIHVDYCGM TLPGRPFALD FDRNKFMEAY IQLQETLGHS 360
  361 RSNSTCNSIS TQMFKEGGYT IFGFELSPVA QDTSLFELVR QTNVSIRLNF REKVPVGGLY 420
  421 CIVYAEFDQI FSLDFMRNPI VDTIIAVENI HSEMYAKLLE AYIRDDAERN ILFNAITTFK 480
  481 FIKAKADWCL RWISDHNAPF SERLAAFAAV EGIFFSSSFA AIFWLKKRGL LPGLTHSNEL 540
  541 ISMFLLHPNC FFSTFNLQRR RKPAESRITE IINESVLVEQ DFVRESLPTN LIGMNQHMMC 600
  601 KYVEFVADLL LEELGYSKRY NTKNPFDFME NISIEGKTNF FEKRVSEYQR PEMMVDESEK 660
  661 VFDLSALF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle