YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	asb-2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRCLPLG QNARVIIIPA RLAHAASTQA AAATDDAPNF FQKLAHRFQG VPLKGEAHAP  60
   61 KSMFEDCNKE WSAPEPLPAI PKDFKEHPDR DLVNYPYPAR PMYPPKSRLL MMPDSWFTPF 120
  121 QKVTGVSGPY LFFGGLFAFL VNKELWVFEE QGHMTVGWIL FYLLVTRTAG YKIDQGLYNG 180
  181 YQERVNFFKG LIQEDLKEAV EFKKTSAKQT ESLNSIKESY PTALKESMAL QLEATYRKNV 240
  241 QSVATELKRR IDYLKETEES KARVEREQLL KLINSEVDKE FSDRSFKDKY LQNAIQQLKG 300
  301 LNVQL

Type	Start	End	Confidence
Signal Peptide	1	32	0.65
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	305	0.84