YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06928
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKFLLRGYL VEVMIYPLIV VSTCALFTSY NFFLSVLRIH CFIYFLQKMS LFSKFFGGMM  60
   61 QEAPITPQES IQKLRETEDI LEKKQEFLEK KIDDVRKQNA VKYGTKNKRM ALQCLSRKKA 120
  121 FEKQLIHIDG VLATLEHQRE TLENASTNAE VLTVMKLASD ALKAVHNNMD SDQVRDMMDN 180
  181 IDEQREVAKE IADAISNPGF NNAIDEADLL RELVDLEQEA LDKDLLDARA PPVTLPDTPN 240
  241 IALPASRPRA KEADKDLEDL ESWAN

Type	Start	End	Confidence
Cytoplasmic	1	12	0.64
Transmembrane Helix	13	34	0.85
Non-Cytoplasmic	35	265	0.74