YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06925
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTKAKISGA FPREKYGMQV RNRRKVCKQH TSRANSSTFP TKMSGFENDI SIGATMTQSQ  60
   61 TSQGFSLQMF GKPTIVLAHL SFKGAALFFY FFANFFTNSF IVQFLVILTL LSMDFWTVKN 120
  121 ITGRLLVGLR WWNFVDADGN NHWKFESAKD MTRFATIDRR VFWLGLVVGP AAWIFFVVTA 180
  181 FLTLKFEWMI VALLGALMNM ANLWGYLRCR WNNTEQMTSY FQKWAFLNVL RRAQQPPQEY 240
  241 QNPVFSA

Type	Start	End	Confidence
Cytoplasmic	1	74	0.93
Transmembrane Helix	75	93	0.89
Non-Cytoplasmic	94	99	0.75
Transmembrane Helix	100	118	0.92
Cytoplasmic	119	160	0.93
Transmembrane Helix	161	182	0.95
Non-Cytoplasmic	183	187	0.82
Transmembrane Helix	188	207	0.94
Cytoplasmic	208	247	0.97