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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWFDDKIHK VFFRVGENVH KFRLYFLLLS FAILTFSAFG FLWFTEQTTN DPQYVFSPAN  60
   61 APWRYERAVL TEHWPLDEEK FWPGKSYDLH GYVDVIASGR IHPDYGRPNI LNIRYLDEVA 120
  121 RINDYIIHNL TVPVDINGKH YDIAYTDLCM RYDWACYLND HITMLMPKTR WGNFSGPFAE 180
  181 LASDIINTQV NITYPIGWRG TEPIYFGALV GAPNLVDEEG HFDYASAIRL TYNTREGKVD 240
  241 QYGIEWRRKL SMWLTDKENP VSELLEFGVN HNMTLPEGLQ DVADTLAPKF VGTCAILFTF 300
  301 SFLVSVVLRK HRTGQVMPDW VRSKPLVAAA GLMTPIMATV TSFGLILWCG FLYNAIVNVS 360
  361 PFLILCIGID DLFIMCAEWH RTNPQHSPEK RIGKTLSEAA VAISITSLTD IATFAMGCYT 420
  421 TLPGVQMFCM YTCVQCFFCY VYQIIFLGPV LAYAAEMEQN GQHVLLIRKA VDPDKTESPV 480
  481 KLWLLSGSVN RQDQEARRRN SRKVAPVEKE GEKKSKFGEV VEKLEHTLEK HDDDPGHNSE 540
  541 ETLVSKVFRE IIGPFILQKS TQVCALLLYL VYISLAIGGC LNIKEGLDPK LLVRESFYLS 600
  601 KFYEIIDETF WREGLQMQVV VNNPPDLFTP ETRKGFDEMM AEFENTQYTM HPNATMIWLR 660
  661 AYEHHLETEV HELNIEKPNS TVEWYTRCRD WLIVAGGRRL WQMDMVWANT TFEETPRITA 720
  721 FRFQLGLRNY RTPTDHTHSC KLMRSIADKY SMFNVTTFHE YYPFADQYLE LTPSLFQNMI 780
  781 SDLCTIFAVS WVMIPELICA VAIVLSIASI NVGVLGFMSF WGVNLDSVSI ITVIMCIGFS 840
  841 VDLSAHIAYA FSQSYGNSHA RAVAALETLG WPVFLGASST VLGILLLTLV DSYIVQIFFK 900
  901 TVFLVINFSI LHGLIFLPIF LMKVVREVKE ESPRDDQSVE NEKPKIQIEM ESQVAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle