YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06833
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQLLVQWLI FGMGWMEDFP LGGQMTAVFV RNYKDILNFG FDKAVEDAVG RFPSYSFLMT  60
   61 GHSLGGAMTT VFSLHVALRY PAKQVRLYAW SGPRSGDETF VKMLKEHVFE QYRIVRDGDF 120
  121 VPDFPLRISQ TLPAAHHNTF EIYYPKHMTT DNYRICDQAE TESCLKGSWW KTMFSHIFMF 180
  181 DMNFFNSQFM DYCE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.66
Transmembrane Helix	8	28	0.64
Non-Cytoplasmic	29	57	0.88
Transmembrane Helix	58	78	0.79
Cytoplasmic	79	194	0.79