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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7495619
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFALVGSEA VCLTAAVVQL LKSDRGAWRV DLPHGVISLV KDYAQRAYFL RIFDILEERI  60
   61 VWDFKLYKAF RAQSFPQCRK LLAFEQMENG EDGVVIGLNF FSEYEAAEFK RKRIYCNFYF 120
  121 TYIYGVIKVM SKKIVHLFQF LSTDELREIS IRSSSHSKNN NMWMVVSEDP AGRLRYQYHN 180
  181 LPVAQSFPPP SHPPPPSATT NPSSNKPSTV SSAAQIYSSF PSSTSSSGTG GHLHHNHMQR 240
  241 FARGGCSSFP DSMGSSPRTT HRSHTLPNGG YYEMEQYDNV NDYSTYGGPD STSSSTSSSA 300
  301 EYQDPVYSTR YGGSTGTYAR RQNYARCYVP ISADAFYYYH NQQKQLQQQH HQQQQQQLAF 360
  361 RPRHRSSHHH QEPRRHRAPS PDPDYSPPLS RNKVRFHIPE EPVSRGDYVS SRHVFNTDDF 420
  421 GDEDDDYESV SMNPDPAPHS DSVLVHRSNG QVSVMVTKKE EPIYCSGGSD SSTESSSATP 480
  481 SSVEADTPPP IPSHPPARHR LVKKSSSSTS ISLNGIGSTP TRQFEITQAY GGTIRGPPMA 540
  541 IGGGQGITQM GTMAAAPQSH THTDGNASSS GSWFRKDKNK KKDKKSKIKK EDISNPTNFQ 600
  601 HKAHVGWNQD SGFSNTVYDD DMDEATKNIL KAAGLESNNL NEDDKKFVKK FIAKNYDKYV 660
  661 SVGSLDPSQI SSPLPPPIQQ HPQMNQSWNQ TPVRQYKPSF PSSAPIGSGA SSYSTPAAPP 720
  721 PPTRVESHGL APARPPPPPP SSGTRGIAPS RPLPQAPNYG TPENRPHAVP PPPPPPPPQS 780
  781 FGMAPISSAA PPPPPPPPPM GLPAVGAGAP PPPPPPPPSG AGGPASVLAK LPPAQDGRSN 840
  841 LLAEIQAGKQ LRSVQQTADS PKSAGGDARG DVMAQIRQGA QLKHVDAAAE QERRKSTTSG 900
  901 AAGMGGLAGA LAKALEERRM NMGIDDTSDD DDDEDDKNEC PSSTILDLKN YRIVNFQDKL 960
  961 SYILKVTNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle