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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7511364, gi|1...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFSANKAY VNFTNKVDPA DQFAFLEKEL SNAEKCPNRI SENCTSIVHI VAHIGPGVFE  60
   61 KTPNFTWFRD EYNERFLDLT VRYANSIGWM IFGHHHTDTF HLIKDSKENN VQLALMAPAV 120
  121 TPWFSDLPGA GANNPTFRVY ETDAYSKIQD ISTYFINLDD LNKNKSTPFV FEYSFKDAYG 180
  181 ITGDINPTTM SALLDKMKNN DTLFKKYIDY NTAFWNPQMP LGVYRGAQLC SMEYSDYPRY 240
  241 YSCLSKYTKS ATRSLNIPLF SLFAIIYTEL FLFLSFSKWV LHFQLFSDIH TRYKNSTYQH 300
  301 PKKKEKSPKN AILINLKNTL GGEKFTVEDV KQELAPFGII RAVQICPIDA CQAFVVFQND 360
  361 YERSARQSVS RLLELTSGTM FVNGYMWTIC RPVKCNHVAR THEEREVEEP GITTSRGVTV 420
  421 DELSGIFASF IQQNSSVSQT SIFSDSTQSF SSYSLFSRSR TVSSSSSQYA ESCDSSATIT 480
  481 PFSYYPAQQS TGFLNLPPPY HTLPDTAFFR RTKIIPPPPM RQEIAPVTQQ IMNCYINSIR 540
  541 KGDSEIGRQR QLSLCSKMEL EYNWTGSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle