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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ugt-4
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVLCVLLF SVLVSHVESY KFLVISPVYG YSHMKFMAII ANQLADEGHQ VTYFQPFVIE  60
   61 AYLDHKLLNN SLIDVINYWH DEEGRRHIPP SNDLHDAWYS SKYQSALSAV FDMPQFLVSA 120
  121 WEHMCRKIFQ DSELHKILKD KDFDVVIAET FDFCGLYLAD YIQSKSIVSV FTGSRLIAIT 180
  181 DPLGEPSSLH YIPAPSSDNF GSSASIFDRI NDLYHKYVFG SGYSIIFDWQ YNQIARLTHG 240
  241 KVRHWKKILK DVTYHFANSN PYLDFAAPTI SKVIPIGGYD MDKSIQTKIP DEFDSILNER 300
  301 SLTVYVSFGS MVKAKFMPES YKEAMLRMFT ANTQNITFLW KYEDPTDIFF KNRLPKNVIL 360
  361 KDWFPQRALL ADKRVKLFIT HGGLGSTMEL AYAAKPAIVI PLIAEQPDNG KMLARHGSAE 420
  421 IYSKHDIPHW EKLNRLLQKM LQHSSYQKAA DRLARVLSNQ PIKPRELMIK HSEMAAMFGK 480
  481 MPELTPSVQD MSIIEFYNLD IIFLFLIISI GTSVLLWKFL YFVLTDSGSF KSKED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle