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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tre-3
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNPWNFFVF VLFIICGPLG SNQVEVHVCD TTNSNNSFIY CNGPILDAVN YHSLYNDSKE  60
   61 FVDMPLKDDP QIVYNAWRAK YGNQSSANLN KSDVQAFVNQ YFSAAGTELV VCTPDDWQEK 120
  121 PPKLATIADP KLPIEQHTSR YSLLYVPNSF IVPGGRFREF YYWDAYWIIK GLIASDMYNT 180
  181 TRSMIRNLAS MVDKYGFVPN GGRVYYLQRS QPPFLAAMVY ELYEATNDKA FVAELLPTLL 240
  241 KELNFWNEKR MTDVQMNGKS FKVYQYKTAS NVPRPESYRV DTQNSAKLAN GADQQQFYQD 300
  301 LASAAESGWD FSTRWFSDYK TLTSIETTKV LPVDLNGLLC WNMDIMEYLY EQIGDTKNSQ 360
  361 IFRNKRADFR DTVQNVFYNR TDGTWYDYNL RTQSHNPRFY TSTAVPLFTN CYNTLNTGKS 420
  421 QKVFDYMDKM GVFTYPGGIP TSMSQESDQQ WDFPNGWSPN NHMIIEGLRK SANPEMQDKG 480
  481 FLIASKWVMG NFRVFYETGH MWEKYNVIGS YPQPGSGGEY DVQDGFGWSN GAILDLLLTY 540
  541 NDRLFVPENF VNTTVTPSVE STTKSAPKYA KLPWVLVFAF MIRQLFNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle