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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: asic-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGGFVQIF KDFSNWSTVA VVPHVANANN KISRIFWIAI FLFVLGMFAY ELYILIAKFF  60
   61 SYPATVNTEI LFEKQIFPVV TVCNMNPYKY SVVKSNSAFS SVNTLMTTYS DATVGTFSTD 120
  121 KWGLYADNDE TYDLDSRAAD ALVLEANLIS DTAKVPALYT YADLIQDCSF AGIPCSESDF 180
  181 TKFIDPVYGA CYSFNEDASL NYSVSREGIQ FGLKLMLTVT QTKTNGNTDS LPTTKLAGAR 240
  241 IGVNSRGSSP GLDSNGIDAG VGYESAVSVS LTQNVRAKKP YGTCVDREPD SSDYYKDFIY 300
  301 TLETCFNGCK QRDTIAKCQC ANPRLALGST DTACQPIKAD LDCLQTLKGN QTSSTPNIDL 360
  361 LVECNCNPPC DESTYTPTVS LAQFPSTSYY VATSSTAGVG SCSSTNSKFS SKSDCQKWYN 420
  421 NNGMIIQVFL ETLSYELYTE TAGYTVSNVI NDLGGQAGLW LGLSVISVVE MTGLMLVMGA 480
  481 FCVTGGAIKM APDDDEIEND HRIKDVEDVK KEIDHLEKKH GEMESGSDGE VDDIENKGDE 540
  541 EKKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle