YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06436
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGRSLSYC TYFEYYYYFV HTNTHIKALK KFEVFIVFLF YRMLLLVPSI LLISTVLSQD  60
   61 IPEYGPISAN FDAWLDRNGY GKYDYARLDL GTAGSFGGMS SDMEYFDTSK DPVIFFHGNS 120
  121 DAALTANNFS TGWTTTVQYF LNQGYTLGHL YGTSWGNTNT TAAVERDHDC VTVFRLRKFV 180
  181 EAVMDYTGAK QINIISHSMG VTLARKVILG GYINADDGSC NIGKPLGNKV RVILGIAGAN 240
  241 FGLCACVGHW LGVTWPTCND DNGLWPGETC YPNPMNGQCA ASPLPSPCNG LTYSKFLMDL 300
  301 NNSRFKPAQH IFSMWSMGDD LIGDGNMVWG RPTSEIPFSD SNKIYKNYTH METKLNTAAD 360
  361 QFHIITQLTI P

Type	Start	End	Confidence
Cytoplasmic	1	33	0.89
Transmembrane Helix	34	57	0.77
Non-Cytoplasmic	58	371	0.93