YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06303
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFGVRTVQ IASLAGFSWG GSKLDDIQTA KLRTCPIQVQ QPEKVQNDVL LSRKVINHLD  60
   61 KSNLKLRLYQ YETCPFCCKV RAFLDYHGFS YEVVEVNPVT RSQIKFSTTY KKVPILRSGE 120
  121 TTMTESTLII STLATYLQRP DQSLDQIIQM YPAVDSTNEK GKPVLNYPNK FFVMKGKVDG 180
  181 DANMASAREE REWREWVDNW FIHLISPNVY RNWNESVETF RWFEQVGDWH RTFPAWERVL 240
  241 AVYVGAAAMF LLSKTLKKKH NINDEREELR KACRDWMAAI GPNRQFLGGD EPNLADLSLY 300
  301 GAMNSFYGCS AFKEVILEEK IAEWWRKMDA LVKNHDGRKA LESRSQK

Type	Start	End	Confidence
Signal Peptide	1	20	0.59
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	347	0.94