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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE06287
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFLFGFLN LINVLKINYL QLMRRGCRHH LAAVVLLIAT FPPLAYNQNI GGINQNIGGT  60
   61 PQNPTINQVS PGQIFSGTGN NPFYGVNLVP FGPEAGDLMV NPSMLTSGMT IDLYMFFPYY 120
  121 GGLYNYTTIS VNGYLGFATV LDQGPTINVG PETTDWPRQE DPAMIAPYLC KQQVPQQGNP 180
  181 ARRAGVYYRL LLRQSLFGRE SNSNLNLGGT LQQNAFFGQQ ASQACPGTAD SYVRCDSNSD 240
  241 YFLDQMMIWV QEGVAGGAMF RADAAVVVTW YNTASAISGR SDIDAGQTGT YQVIWLTDST 300
  301 ARLSYVIINY DRLGFDAQDF RGNSRSGRCR AVFNGGNHTG TVEVDPTQPY KNTPKVLAQR 360
  361 SGVPHMVRGR YMFRVDDVVR PAGCSNKTGG TYPIMIYPNI VNMLGDMTVD VNACCLDRTQ 420
  421 TYIMMIEERE VATCQVINPA IARCSLPRIY DWGTKTVYFQ PESRGANDEK AFVGYIYFVP 480
  481 PTLDPMRLDI GNIYEWYKNP MTNYLMPITW YPRNFTNPDI LTNGNNMGVR ISDDSMYGVQ 540
  541 LGLYIVGYRE FKDDEIKKFR PEYRTLARIT TYSNQNNANY RWMPQEEVIN TNQVQQWYLT 600
  601 DWERMHTLYT YRVGFFKLAP INPNDANGTQ LLPGLVSAPI SLHWLWTPEN QQFATLTLNQ 660
  661 QDRDQRIEFV KEKSREMCHD WYDEDGALWN FIRDTETNTS CPCIETQALL DLGRFMPHPR 720
  721 CSQMFRDITC TTVIGSKNCY MSSSNIYSSY AGNGNTFNNM DTNRFMTHYG QVCCYDESGY 780
  781 LMQTPYQPVI KTQREYFYNP GYPLRAYEFG TAPYMGQFEV PGLSVFHNDY MPYFLCCKFA 840
  841 DFRCQMFYWR RPSSACQQYQ PPAIGHAQGA GVFQTIDNDK FIFNQPGVFN FLYIPQSVRT 900
  901 PEVRIQTRLE RYPNRKVDFG LLGRYISQYE LVQPTNATVI TGIALEATGT ERVIVMTRKD 960
  961 TRRFRYRTNI IVGNILRYFD TIRLQRFRGV LIYVNNVERG QPEIYVVLEE AQIGVKVTES1020
 1021 YALDIDRLPN YQESMGMLDI QISVSPQYGV RPDGDKTQET QYRQMYNLPR VSGLIRPYPD1080
 1081 QTSGSLNEGL TLNDVNSDSY RQQIINNYLV LGTGEPGTQQ NQAGTLNQNM PQDNMFTTSR1140
 1141 DEDKQFDVFP EASMRSEPVY KTAPIFDTGS YRFVPQTGAM ILQLLNTCRD LQNNPNTDLQ1200
 1201 PYQSIATLSY GLQCPDDPGQ VLTECGDSVA CLYDYALLNS KVLGQEEQDA WNMFTTDRAL1260
 1261 AIRQYNSCGA INIEYPEYMM KTPALSSGYL QGDVARFECY QSHWVKGDHE YKCGIVVDYN1320
 1321 RPNEYRFEWN KGNQPWCRSR IKENYFKWLA VIAGIVGIII VILLIFLVFW CIKRKKLQES1380
 1381 RNYSGTAAYS NNAFQNQTYE TKPSRALSVG DLSTAPRTVA MPPPRGTTAT PMTLEPRGFS1440
 1441 PVPSDVRGSQ GMLGLNTSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle