YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06190
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDILVSLCI FLVLIGKSDT KWFGKFGRSQ AKGLPVILVP GDGGSQLESN LTGKPSVVHY  60
   61 VCSKQTADYF DLWLNLQLFT PLVIDCWADN MQLVFNTTTG LSENMPGVDI RVAGFGATES 120
  121 VEWLDKSKAS QGRYFFDIVD SMVSWGYRRG KNVIGAPFDW RKSPNELNDY LIQLKSLIET 180
  181 TYRWNDNQKI VLVGHSMGNP LSLYFLNNYV DQAWKDKYIS SFVSLAAPWA GSMQIVRLFA 240
  241 SGYNMNYYRV ILPPSSLRAM QRSFSSSAFL FPSPVAWKPH EILATTADKN YTVGNIKEFF 300
  301 QDINYMVGWE QYKQAARLNG NLSSPGVPVH CIYGTGVPTP EKFSWAPGYF PDYPPTEFMG 360
  361 DGDGTVNKKS ATVCTNWIGN NNGYKVTVHE VFQADHMAIL KHPNAIELVR KAIFQLI

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	417	0.99