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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cdc-48.3
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAKKKPSL VTCPQCNAVV LTKDSLRHQD FCGKPVVESE IACAQNGTLR GFNVAVDKAE  60
   61 GFLPPDAVGW EKEHSILINQ QTMESLGLLA RQPVRIIHSS DSFIGIVWPC KEVALLKVSI 120
  121 ISSRIARERM ITLESCGRVE KLKSLSVTVK TSLTLNPALS GFLEAYLSHS YLQYNSSVDL 180
  181 KYLGQNVTVT PEEPIESKMS AMGIDDDKKR NSKVVSTAVG YKIQILNASA EGSTSDVLQT 240
  241 LPTDLSNIGG CFTAKQVLED YVISPVRQKE SPCSVLIWGL PGSGKTLLLK EVALVLSGST 300
  301 TYIGSCEELM ELNGVTTGNI VIVDVNELEK ENTKANRALS FLLGDEKKCV ILCVRSSETL 360
  361 DIGFRVRFPI EAEITVPTQD ERLDILSKIG NIYNFPLELH LDVARHTHGF TGGDLCSLLK 420
  421 AAKFARGRTH LERVNDARKR IRPTGIRQFI LEVPNVSWND IGGNEELKLE IQQAVIWPQK 480
  481 HPEAFERFGI DPPAGILLYG PPGCSKTLIA RALASEAKMN FLAVKGPELF SKWVGDSEKA 540
  541 IRDLFSRARQ VAPTIVFFDE IDAVGSSRGS EKSSGVSDRV LAQLLTELDG LEKSSRVILL 600
  601 AATNRPDQLD SALLRPGRLD RAIYVGLPCE VTRRAILEMR TKKMKFDDTV RTIDKLVEKT 660
  661 SGYSGAELVA VCRTAAMFAM RESIDATIVQ WTHFEQALAA VVSRTEAYLL EIYDDFKAGR 720
  721 ASNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle