YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06040
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITSMPYNRL REAILHKRKL SKHILVAMVL ISSMLLLINI MQDSNEEGDD VPVEGTPTFK  60
   61 AFYNCVYPKL ASLRGNYEMF WTSFVNLTKE CDGLEEYKAL DIQPVANTDE VKYVAFPKRD 120
  121 ENITMVTLGI GHDVDAEMRL KKLWPKTEFF GVDPSPEINK DLYEVKLGGN YFQIAVSGKG 180
  181 GMQKSYIFRK EYRDEATMHI GADYFFGDML QKPRVDILWM DTEGNEFPVL DMIHRGGPLD 240
  241 QRGVTICQMN IEIHKDLMKD ITGEREKFHD FVWKLLADKK YIMVKPFYVY WFHQFIRTVI 300
  301 INVADPECTN LYMN

Type	Start	End	Confidence
Cytoplasmic	1	19	0.92
Transmembrane Helix	20	41	0.85
Non-Cytoplasmic	42	314	0.99