YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE06030
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNNSTANA TDHNVETCTG DICNGFGECR VLNPGMLIER FECMCDLWHT GQLCQYDVPL  60
   61 PIAITITTTL FTWLILFFFW YSSRRFEKKK IHFPSRRRRF VDYLINAQRS EKLELNSQQQ 120
  121 LGNRHSGSSE LVKSESRKKA KSSNQKEKVK PEKRGRATAT TGAGPTIDQS LKGPTGTTMA 180
  181 SERGMTMTQT IQKEKSIKKK KSEKDERKRA KEVGNEEAAA DNQTVTQGND TTTTQGPSSM 240
  241 FPADLSKKHR LGLQKVKERA VEVPEKKKTK NNE

Type	Start	End	Confidence
Non-Cytoplasmic	1	59	0.85
Transmembrane Helix	60	81	0.93
Cytoplasmic	82	273	0.85