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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: aman-2
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRNFYIIL CLGVFLTVSL YLYNGIETGA EALTKRQAND LRRKIGNLEH VAEENGRTID  60
   61 RLEQEVQRAK AEKSVDFDEE KEKTEEKEVE KEEKEVAPVP VRGNRGEMAH IHQVKQHIKP 120
  121 TPSMKDVCGI RENVSIAHSD LQMLDLYDTW KFENPDGGVW KQGWKIEYDA EKVKSLPRLE 180
  181 VIVIPHSHCD PGWIMTFEEY YNRQTRNILD GMAKHLAEKD EMRFIYAEIS FFETWWRDQA 240
  241 DEIKKKVKGY LEAGKFEIVT GGWVMTDEAN AHYHSMITEL FEGHEWIQNH LGKSAIPQSH 300
  301 WSIDPFGLSP SMPHLLTSAN ITNAVIQRVH YSVKRELALK KNLEFYWRQL FGSTGHPDLR 360
  361 SHIMPFYSYD IPHTCGPEPS VCCQFDFRRM PEGGKSCDWG IPPQKINDDN VAHRAEMIYD 420
  421 QYRKKSQLFK NNVIFQPLGD DFRYDIDFEW NSQYENYKKL FEYMNSKSEW NVHAQFGTLS 480
  481 DYFKKLDTAI SASGEQLPTF SGDFFTYADR DDHYWSGYFT SRPFYKQLDR VLQHYLRSAE 540
  541 IAFTLANIEE EGMVEAKIFE KLVTARRALS LFQHHDGVTG TAKDHVVLDY GQKMIDALNA 600
  601 CEDILSEALV VLLGIDSTNK MQMDEHRVNE NLLPEKRVYK IGQNVVLFNT LSRNRNEPIC 660
  661 IQVDSLDAGV EADPPIKKQQ VSPVIAYDEE KKTLVVKNGI FELCFMLSLG PMESVSFRLV 720
  721 KNTTTSKVEI ITNNAAEFKE TSFKSSSTSG DFTVKNDKVE AEFDGENGMI KRATSLVDDK 780
  781 PIDLNSHFIH YGARKSKRKF ANGNEDNPAG AYLFLPDGEA RELKKQSSDW ILVKGEVVQK 840
  841 VFATPNNDLK ILQTYTLYQG LPWIDLDNEV DVRSKENFEL ALRFSSSVNS GDEFFTDLNG 900
  901 MQMIKRRRQT KLPTQANFYP MSAGVYIEDD TTRMSIHSAQ ALGVSSLSSG QIEIMLDRRL 960
  961 SSDDNRGLQQ GVRDNKRTVA HFRIVIEPMS SSSGNKKEER VGFHSHVGHL ATWSLHYPLV1020
 1021 KMIGDATPKS ISSKNVEQEL NCDLHLVTFR TLASPTTYEA NERSTAAEKK AAMVMHRVVP1080
 1081 DCRSRLTLPD TSCLATGLEI EPLKLISTLK SAKKTSLTNL YEGNKAEQFR LQPNDISSIL1140
 1141 VSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle