YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	hrg-4
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHAFLVIKY YWHIFFVEFS KCTSSTRGSA KKEHVNYRMT AENRGFCQLI CHINVRIGWT  60
   61 IFGIVFGISA ILTYAIKFHN WSATATTAIA TLFACETLYL YWALKKNTIV NWKSSTFQLM 120
  121 IWPNVFIGLL GLLGCLVCYI IAGITHQGAG SIQAMYGENL WFTGSWSLVI TKWTWQNAFF 180
  181 ARKYLNKIGT ASEDGDIDDD DVEVIKS

Type	Start	End	Confidence
Cytoplasmic	1	54	0.97
Transmembrane Helix	55	76	0.91
Non-Cytoplasmic	77	82	0.82
Transmembrane Helix	83	103	0.94
Cytoplasmic	104	120	0.93
Transmembrane Helix	121	143	0.92
Non-Cytoplasmic	144	158	0.71
Transmembrane Helix	159	175	0.83
Cytoplasmic	176	207	0.87