YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE05786
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLRLCRFLM PSSSAGRCAK LFLLLLSVNS ILIGLVASQL PDELDPFLEK LFDTSECEDF  60
   61 VTSSDYTNIA TSKCDPHTCD FPRQICARPA AKFQDSSANI CRTIPLECLT AANGGVAPGP 120
  121 SIRPPAPSPF IPQPSLPNII SSMLPAPSGG ATPSPSTDPL AICKMGVPNG RFCGFRPMFT 180
  181 YNRETLQCDE FWFPGCRTAE TNANLFEDYQ QCQKIADLCK PTPAPTLAPF RPRPTTRRLP 240
  241 PPTTPPPPPP PPAPSPFVDA FKSFGGNNQA GQGALGALGM FTGSGLGPTG QGPLGNFSPN 300
  301 PNAGAAPNPG PAAGAGGPDG QDLGLFGLIQ QGIMGAQAAG QGKGGKEAAS KAAGQILQQF 360
  361 TGFDLGGIGN NFGGLFGR

Type	Start	End	Confidence
Signal Peptide	1	38	0.81
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	378	0.99