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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE05556
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRIRINKL DVFLVVIAIV FIVFGIVTWA AFSSIYSTLV IKNLQLTENS DTSLGYSAFQ  60
   61 YTSPQVDNIM KFYFFNVTNP DEVKYYSAAP NLVEIGPFSV MESEQKKYLE FSDDKSQMFY 120
  121 QNYKKYILSK DYSCEDCDWD RNIVFPNPPG LGAVASMLDP QFQITKTGRT IIAVALTILG 180
  181 EYPFVSHKVR EVLFDGYEDA LLSAAHSGFV TVLSGIFKGD GGSIVPIPIP AMPKFGYFQG 240
  241 YNNSRDEEYW IETGKKDINQ IGNVQRWAGI TELPGEWWTT PKARSIRGSD SGSFTQMHLD 300
  301 ESSTADMFFS FMCRSFTKTF YQRETIESIP TIGYHIGYDE WDTTSDNNVG FRYRNIEKRN 360
  361 YFPDWPKCPP KGQCHQSGSI DCSKSINFCH ACCDGSLYNG TYLLPPGMFP LVCYPGRLQP 420
  421 TPFAVVYSPP HFLFSPDEVR TTVVGMAPNK SLHEPMIYYH EPYSGTTLKV VNRLQVNMPV 480
  481 IRSHDVPSSQ NMPNVMIPLF WQDTSPKYHQ FIFNEVWLGF VLVPRLMRVL QFVALGIGLL 540
  541 LVAIIVFLQL RKGKPSLIRP LKTSFLETTS NWLSSTSSSN SNESRGLRRM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle