YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	inx-14
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWEIPIIGD FITKPFKAAK LYEFYDRLHL FTVYLLGFFV LLTGAKQHFG NPIDCMLPKQ  60
   61 HDDLKSWRDY IHNFCLFYGT FRYDVSNGTS EFGSYTEDAS VNYYQWVPFF FAFQVCCFLL 120
  121 PFWCWAYMQK LIYIDMAFIV DYSGKINSEK TFEKTKEKVD RIVNYMHDHF KFRRAHKMGY 180
  181 LSWITFNSAF PSVLYSLTKL FFITNVIIQV NLVCKFLDVD SWTWGFDLLG KFIHPTPRAP 240
  241 EFSSFSDKQR FAAILTDGSY NRFQYFPILV GCEYQLQESV SNFVNHKAQC IIPMNVINEK 300
  301 IFIGLYFWLL VLTALSVIGT VKWILRIKSK KLNEVMIYKL IKKSLEREPF DSNIHDHRYN 360
  361 FVHKYLCADG ILLIYFMMDT NGFLKTEEVI GALFKKYCSD AGLEPTAPTL TSSPRDLAYS 420
  421 ETNYGFAAPQ KI

Type	Start	End	Confidence
Cytoplasmic	1	27	0.92
Transmembrane Helix	28	48	0.87
Non-Cytoplasmic	49	105	0.96
Transmembrane Helix	106	127	0.90
Cytoplasmic	128	178	0.98
Transmembrane Helix	179	202	0.83
Non-Cytoplasmic	203	301	0.96
Transmembrane Helix	302	325	0.89
Cytoplasmic	326	432	0.94