YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cyc-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRAVVQGSK RGLAALAGVT AASGMGLVYA LENSVSASGD NVHPYALPWA HSGPFSSFDI  60
   61 ASVRRGYEVY KQVCAACHSM KFLHYRHFVD TIMTEEEAKA EAADALINDV DDKGASIQRP 120
  121 GMLTDKLPNP YPNKKAAAAA NNGAAPPDLS LMALARHGGD DYVFSLLTGY LEAPAGVKVD 180
  181 DGKAYNPYFP GGIISMPQQL FDEGIEYKDG TPATMSQQAK DVSAFMHWAA EPFHDTRKKW 240
  241 ALKIAALIPF VAVVLIYGKR HIWSFTKSQK FLFKTVKGRE PPKAQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	285	0.90